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Agricultural Ecology and Plant Pathology● OpenPreview

Contribution of Pedological, Agronomic, and Microbiological Factors to Primary Inoculum Dynamics of *Fusarium graminearum*

Explore the interplay between soil, crop management, and microbial ecology to understand and mitigate Fusarium head blight in wheat.

Best for:Best for early-career researchers with a BSc or MSc in agronomy, ecology, microbiology, or related fields, interested in interdisciplinary plant pathology and sustainable agriculture.

Université Clermont Auvergne · Auvergne-Rhône-Alpes, France · R1 · First-stage researcher
More professors at Université Clermont Auvergne
Fusarium head blightPrimary inoculum dynamicsSoil microbiologyAgronomic practicesWheat pathologySustainable disease management
Deadline
Nov 10, 2026
27 days
Funding
Salaried
Contrat Doctoral (standard PhD salary in France)
Start date
ASAP
Full-time
Location
Auvergne-Rhône-Alpes
France

Overview

This PhD project at Université Clermont Auvergne investigates how soil properties, agricultural practices, and microbial communities influence the spread of *Fusarium graminearum*, the primary pathogen causing Fusarium head blight in wheat. The research aims to identify key factors driving the primary inoculum dynamics of this devastating disease, offering insights for sustainable disease management strategies. The successful candidate will conduct field and laboratory experiments, collaborate with agronomic and microbiological experts, and contribute to advancing agricultural resilience. The project is ideal for applicants with a strong background in agronomy, ecology, or microbiology, seeking to bridge disciplinary boundaries in plant pathology.

Fusarium graminearumplant pathologyagricultural ecologysoil healthcrop disease managementfield experimentsmicrobial ecologywheat disease

What you'll do

  • Conduct field and laboratory experiments to study the dynamics of *Fusarium graminearum* inoculum under varying soil and agronomic conditions.
  • Analyze soil samples to assess microbial communities and their influence on pathogen spread.
  • Collaborate with agronomic experts to design and implement sustainable disease management strategies.
  • Develop and validate models to predict primary inoculum dynamics based on environmental and management factors.
  • Present research findings at academic conferences and publish results in peer-reviewed journals.
  • Contribute to interdisciplinary discussions on plant pathology, soil health, and agricultural sustainability.

Requirements

Degree required: Master's degree (MSc) in Agronomy, Ecology, Microbiology, Plant Pathology, or a related field

Degree offered: PhD

Language: French proficiency; English proficiency for academic communication

Instruction: French

Required skills
  • Experience in field or laboratory research related to plant pathology or microbiology
  • Familiarity with soil sampling and analysis techniques
  • Knowledge of statistical analysis methods for biological data
  • Proficiency in conducting experiments under controlled and field conditions
  • Ability to work collaboratively in interdisciplinary teams
Nice to have
Experience with molecular biology techniques (e.g., PCR, DNA sequencing)Familiarity with GIS or remote sensing tools for spatial analysisPrior exposure to agricultural or environmental fieldwork
Eligibility
  • Open to international applicants
  • No specific residency or age restrictions mentioned
  • No prior experience caps

Funding & terms

Type
Salaried
Amount
Contrat Doctoral (standard PhD salary in France)
Duration
3 years (standard PhD duration in France)
Programme
Contrat Doctoral (French doctoral contract)
Université Clermont Auvergne

How to apply

Deadline: 2026-11-10

Applicants must submit their application through the official Campus France portal for doctoral positions. The application should include a CV, a cover letter detailing research interests and motivation, academic transcripts, and a research proposal aligned with the project objectives. Additional documents may be requested upon review.

Documents required
  • CV
  • Cover letter
  • Academic transcripts (BSc and MSc)
  • Research proposal (aligned with project objectives)
  • Letter of motivation
↗Apply on site
Lab
Life Sciences, Health, Agronomy, Environment (ED 65)
Université Clermont Auvergne
Contrat Doctoral (French doctoral contract)France
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