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Genetics, Genomics, and Computational Biology● Open★ EU-FUNDEDPreview

PhD Student in Plant Genomics and Heterochromatin Evolution

Explore the role of transposable elements in plant heterochromatin using advanced genomics and molecular biology techniques.

Best for:Best for candidates with a strong background in genomics, bioinformatics, and molecular biology, interested in plant genetics and advanced sequencing techniques.

CRAG-Centre de Recerca Agrigenòmica · Bellaterra, Spain · R1 · First-stage researcher
More professors at CRAG-Centre de Recerca Agrigenòmica
transposable elementsheterochromatin evolutionplant genomicslong-read sequencingmolecular biologygenome assembly
Deadline
Oct 12, 2026
Expired
Funding
Salaried
Not specified (funded by MICIU/AEI grant PID2025-175078NB-I00 and ESF+)
Start date
flexible (upon selection)
Full-time
Location
Bellaterra
Spain

Overview

This PhD position at CRAG, an independent research institution in Spain, focuses on investigating the role of transposable elements in the evolution and function of heterochromatin in plants. The successful candidate will conduct bioinformatics analyses of long-read sequences, including genome assembly, methylation pattern deduction, and structural variant analysis, alongside molecular biology experiments such as Hi-C and ChIP-Seq. The project leverages the model organism *Physcomitrella* and integrates cutting-edge genomic technologies. The position is part of a funded research project and offers a full-time, temporary contract at the UAB Campus in Bellaterra, Spain.

plant geneticsgenomicsbioinformaticsmolecular biologytransposable elementsheterochromatinPhyscomitrellalong-read sequencing

What you'll do

  • Conduct bioinformatics analysis of long-read sequencing data, including genome assembly and structural variant analysis.
  • Investigate methylation patterns and their role in heterochromatin function using computational tools.
  • Perform molecular biology experiments such as Hi-C and ChIP-Seq to study chromatin organization.
  • Characterize the role of transposable elements in plant heterochromatin evolution using *Physcomitrella* as a model organism.
  • Collaborate with the Rosaceae genetics and genomics group to integrate findings into broader research projects.
  • Present research findings at internal and external scientific meetings.
  • Contribute to the publication of research results in peer-reviewed journals.

Requirements

Degree required: Bachelor's degree or equivalent in Biological Sciences, Genetics, Genomics, Bioinformatics, or a related field

Degree offered: PhD

Language: English; good proficiency (equivalent to B2/C1 level)

Instruction: English

Required skills
  • Proven experience in bioinformatics and genomic data analysis
  • Familiarity with long-read sequencing technologies and genome assembly tools
  • Hands-on experience with molecular biology techniques, including PCR, gel electrophoresis, and cloning
  • Proficiency in programming languages such as Python, R, or Perl for data analysis
  • Experience with Hi-C and ChIP-Seq data analysis pipelines
Nice to have
Experience with plant genomics or model organism researchKnowledge of epigenetic mechanisms and chromatin biologyFamiliarity with Linux/Unix environments and command-line tools
Eligibility
  • No specific nationality restrictions
  • No age restrictions
  • No prior experience caps

Funding & terms

Type
Salaried
Amount
Not specified (funded by MICIU/AEI grant PID2025-175078NB-I00 and ESF+)
Duration
3 years (standard PhD duration)
Programme
PID2025-175078NB-I00 (MICIU/AEI) and ESF+
EU-FUNDEDMICIU/AEI and ESF+

How to apply

Deadline: 2026-10-12 (Europe/Madrid)

Interested candidates should send their application via email to jobs@cragenomica.es. The email subject must include 'PhD Student (Ref 50/2026)'. Ensure your application includes a CV, a cover letter, and any relevant academic transcripts.

Documents required
  • CV
  • Cover letter
  • Bachelor's degree transcripts
  • Proof of English proficiency (if applicable)
✉Apply by email

Contact

CRAG Human Resources· Recruitment Contact

jobs@cragenomica.es

http://www.cragenomica.es/

FL
Prof.
First Last
Rosaceae Genetics and Genomics Group
Lab
CRAG - Centre de Recerca Agrigenòmica
CRAG-Centre de Recerca Agrigenòmica
PID2025-175078NB-I00 (MICIU/AEI) and ESF+Spain
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