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PhD Position: Synthetic Cells and Active Transcriptional Condensates

Build DNA-based synthetic cells and investigate transcriptional condensates using synthetic biology and DNA nanoscience.

Best for:Best for life science and chemistry graduates with a strong interest in synthetic biology, DNA nanoscience, and quantitative microscopy.

International PhD Programme (IPP) Mainz · Mainz, Germany · R1 · First-stage researcher
More professors at International PhD Programme (IPP) Mainz
Synthetic BiologyDNA NanoscienceTranscriptional CondensatesMolecular BiologySystems Chemistry
Deadline
Oct 15, 2026
0 days
Funding
Salaried
Duration of thesis
Start date
2027-02-01
Full-time
Location
Mainz
Germany

Overview

The International PhD Programme (IPP) Mainz is offering a fully funded doctoral position at the Institute of Molecular Biology. Working within the research group of Andreas Walther and in collaboration with Jan Padeken, the successful candidate will explore how condensate organisation and transcription shape each other using DNA-based synthetic cells and protonuclei. The project combines synthetic biology, DNA nanoscience, and advanced microscopy in an interdisciplinary environment. Applicants are expected to hold a relevant master's degree and demonstrate a strong commitment to collaborative, cross-disciplinary scientific research.

PhDSynthetic CellsTranscriptionDNA ProtonucleiConfocal MicroscopyMolecular Biology

What you'll do

  • Design and construct barcoded and multi-compartment DNA protonuclei to position genes, polymerases, and enzymes with molecular precision.
  • Execute and quantify transcription processes within synthetic cells, tracking RNA production and condensate dynamics via confocal microscopy and FRAP.
  • Evaluate how the C-terminal domain, transcription factors, and kinases or phosphatases regulate transcriptional output.
  • Investigate the feedback mechanisms of nascent RNA on cellular condensates.
  • Collaborate closely with simulation and in vivo research partners within the CRC/SFB 1551 consortium.

Requirements

Degree required: Master Degree or equivalent in Molecular Biology, Synthetic Biology, Chemical Biology, Biochemistry, or Chemistry

Degree offered: PhD

Language: English; good command required

Instruction: English

Required skills
  • Solid academic background in Molecular Biology, Synthetic Biology, Chemical Biology, Biochemistry, or Chemistry
  • Strong enthusiasm for interdisciplinary scientific research
  • Demonstrated ability to work effectively within an international team
Nice to have
Prior hands-on experience working with nucleic acidsExperience with enzyme handling and protein purificationProficiency in quantitative microscopy techniques

Funding & terms

Type
Salaried
Amount
—
Duration
Duration of thesis
Programme
International PhD Programme Mainz / CRC/SFB 1551
International PhD Programme Mainz / CRC/SFB 1551

How to apply

Deadline: 2026-10-15 (Europe/Berlin)

Interested candidates must apply through the online IPP application platform and select Walther as their group preference. Applicants are required to submit all requested application materials and arrange for two letters of reference to be provided by the deadline.

Documents required
  • CV
  • Master Degree certificate or equivalent
  • 2 reference letters
↗Apply on site

Contact

AW
Prof.
Andreas Walther
Institute of Molecular Biology
Lab
Andreas Walther Lab
International PhD Programme (IPP) Mainz
Germany
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