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Computer Science● Open⏰ 6 days leftPreview

Doctoral Researcher in Probabilistic Machine Learning

Join a leading research team at Aalto University to develop biology-informed machine learning methods for dynamical systems.

Best for:Best for candidates with a strong background in probabilistic machine learning and an interest in computational biology.

Aalto University · Espoo, Finland · R1 · First-stage researcher
More professors at Aalto University
Probabilistic Machine LearningComputational Systems BiologyBayesian InferenceOrdinary Differential EquationsGaussian ProcessesDynamical Systems
Deadline
Until filled
rolling
Funding
Salaried
€3.2k/mo
Start date
flexible
Fixed-term
Location
Espoo
Finland

Overview

Aalto University is seeking a motivated doctoral researcher to join the Department of Computer Science. The successful candidate will work on developing biology-informed Gaussian processes to model complex dynamical systems in biology. This position is situated within a collaborative environment involving the Computational Systems Biology group, the Finnish Centre for Artificial Intelligence, and the ELLIS Institute Finland. The role focuses on integrating mechanistic ODE models with flexible machine learning approaches to improve uncertainty quantification and interpretability. Applicants should have a strong background in machine learning, statistics, or applied mathematics.

PhD positionMachine LearningBayesian ModelingComputational BiologyAalto UniversityBio-informed ML

What you'll do

  • Develop and implement biology-informed Gaussian process models for dynamical systems.
  • Conduct research on uncertainty quantification and inference from heterogeneous biological data.
  • Collaborate with interdisciplinary teams at the Finnish Centre for Artificial Intelligence and ELLIS Institute Finland.
  • Contribute to the development of interpretable mechanistic ODE models.
  • Publish research findings in high-impact machine learning and bioinformatics venues.
  • Participate in the academic activities of the Department of Computer Science.

Requirements

Degree required: Master's degree in Computer Science, Statistics, Applied Mathematics, or a related field.

Degree offered: PhD

Language: English proficiency is required for research and communication.

Instruction: English

Required skills
  • Strong background in probabilistic machine learning or statistics.
  • Proficiency in programming for scientific research.
  • Ability to conduct independent research in a collaborative environment.
  • Strong analytical and mathematical skills.
Nice to have
Experience with Bayesian inference methods.Familiarity with modeling biological systems or ODEs.Experience with foundation models for dynamical systems.
Eligibility
  • Must have completed a master's degree before the start of the contract.

Funding & terms

Type
Salaried
Amount
€3.2k/mo
Duration
2-year fixed term with option for 2-year renewal
Programme
Aalto University
Aalto University

How to apply

Deadline: 2026-10-21 (UTC+3) · open until filled

Submit your application through the Aalto University Workday recruitment portal. Ensure all required documents are combined into a single PDF file.

Documents required
  • CV
  • Cover letter
  • Academic writing sample
  • MSc transcripts
  • BSc transcripts
  • Latest degree certificate
↗Apply on site

Contact

Julien Martinelli· Research Fellow

julien.martinelli@aalto.fi

JM
Prof.
Julien Martinelli
Department of Computer Science
Lab
Computational Systems Biology
Aalto University
Finland
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